Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KO1

Dihydrodipicolinate synthase (DHDPS) from C.jejuni, E88D mutant with pyruvate bound in the active site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-25
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths85.160, 232.650, 201.860
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.000 - 2.500
R-factor0.181
Rwork0.179
R-free0.22140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ly8
Data reduction softwareHKL-3000
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.0002.589
High resolution limit [Å]2.5002.500
Rmerge0.675
Number of reflections687206214
<I/σ(I)>18.31
Completeness [%]98.789.98
Redundancy15
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH7.4288.150.3 M Magnesium acetate, 10 % PEG 8000, 0.1 M Sodium acetate (pH 7.4)

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon