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7JRN

Crystal structure of the wild type SARS-CoV-2 papain-like protease (PLPro) with inhibitor GRL0617

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2020-08-10
DetectorADSC QUANTUM 210r
Wavelength(s)0.97919
Spacegroup nameP 1 21 1
Unit cell lengths46.733, 144.872, 60.145
Unit cell angles90.00, 99.26, 90.00
Refinement procedure
Resolution39.640 - 2.480
R-factor0.2474
Rwork0.245
R-free0.28720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6wzu
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.540
High resolution limit [Å]2.4806.7802.500
Rmerge0.1580.0540.504
Rmeas0.1680.0580.537
Rpim0.0570.0190.182
Number of reflections238681235915
<I/σ(I)>5.4
Completeness [%]86.287.366.6
Redundancy7.27.66.8
CC(1/2)0.9990.967
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529830 % PEG 4,000 0.2 M Li2SO4 0.1 M Tris pH 8.5

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