7DV4
Crystal structure of anti-CTLA-4 VH domain in complex with human CTLA-4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979183 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.591, 110.336, 134.185 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.330 - 2.380 |
R-factor | 0.223 |
Rwork | 0.221 |
R-free | 0.25800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3osk 5aze |
RMSD bond length | 0.009 |
RMSD bond angle | 1.226 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.730 | 2.460 |
High resolution limit [Å] | 2.380 | 2.380 |
Rmerge | 0.037 | 0.867 |
Rmeas | 0.041 | 0.953 |
Rpim | 0.016 | 0.391 |
Total number of observations | 293482 | |
Number of reflections | 45646 | 4411 |
<I/σ(I)> | 23.5 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 6.4 | 5.7 |
CC(1/2) | 0.999 | 0.693 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 100 mM sodium citrate, 10% (w/v) PEG 6000, pH 5.0 |