7CXK
The ligand-free structure of human PPARgamma LBD R288H mutant in the presence of the SRC-1 coactivator peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-30 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 130.396, 51.997, 54.052 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.041 - 2.200 |
Rwork | 0.237 |
R-free | 0.26360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gtp |
RMSD bond length | 0.009 |
RMSD bond angle | 1.365 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.073 | 0.646 |
Number of reflections | 19382 | 963 |
<I/σ(I)> | 31.63 | 4.31 |
Completeness [%] | 99.7 | 100 |
Redundancy | 9.8 | 10.1 |
CC(1/2) | 0.995 | 0.920 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 295 | 2.2 M sodium malonate (pH 7.0) |