Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7CD5

mAPE1-blunt-ended dsDNA product complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13C1
Synchrotron siteNSRRC
BeamlineBL13C1
Temperature [K]100
Detector technologyCCD
Collection date2017-02-23
DetectorADSC QUANTUM 210
Wavelength(s)0.97622
Spacegroup nameP 65 2 2
Unit cell lengths107.210, 107.210, 230.792
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.892 - 2.700
R-factor0.191
Rwork0.189
R-free0.21540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1hd7
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareBALBES
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.800
High resolution limit [Å]2.7005.8002.700
Rmerge0.0910.0440.499
Rmeas0.0930.0450.517
Rpim0.0200.0100.133
Total number of observations431037
Number of reflections2236624772061
<I/σ(I)>8.4
Completeness [%]99.599.994.9
Redundancy19.320.413.6
CC(1/2)1.0000.938
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1M Bis-Tris pH 6.5, 25% v/v Polyethylene glycol 300

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon