7C61
Crystal structure of 5-HT1B-BRIL and SRP2070_Fab complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-06 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 248.800, 65.700, 79.730 |
Unit cell angles | 90.00, 98.79, 90.00 |
Refinement procedure
Resolution | 40.000 - 3.000 |
R-factor | 0.2541 |
Rwork | 0.252 |
R-free | 0.28980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4iar |
RMSD bond length | 0.008 |
RMSD bond angle | 1.680 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.21) |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.500 | 48.500 | 3.180 |
High resolution limit [Å] | 3.000 | 9.000 | 3.000 |
Rmerge | 0.483 | 0.107 | 3.257 |
Rmeas | 0.491 | 0.109 | 3.317 |
Rpim | 0.090 | 0.021 | 0.617 |
Total number of observations | 760396 | 28687 | 116234 |
Number of reflections | 25815 | 1015 | 4119 |
<I/σ(I)> | 9.2 | 31 | 1.6 |
Completeness [%] | 100.0 | 99.2 | 100 |
Redundancy | 29.5 | 28.3 | 28.2 |
CC(1/2) | 0.992 | 0.992 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 30% PEG400, 0.4M SODIUM THIOCYANATE, 0.1M SODIUM ACETATE PH 5.5 |