7C2N
Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with SPIRO
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 86.490, 140.386, 145.229 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.540 - 2.820 |
R-factor | 0.2343 |
Rwork | 0.232 |
R-free | 0.27340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ajh |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.540 | 44.540 | 2.890 |
High resolution limit [Å] | 2.820 | 12.600 | 2.820 |
Rmerge | 0.077 | 0.024 | 1.300 |
Rmeas | 0.085 | 0.029 | 1.434 |
Total number of observations | 234546 | ||
Number of reflections | 43256 | 537 | 3053 |
<I/σ(I)> | 15.18 | 46.51 | 1.38 |
Completeness [%] | 99.4 | 95.6 | 95.5 |
Redundancy | 5.422 | 4.685 | 5.444 |
CC(1/2) | 0.999 | 0.998 | 0.624 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 293 | 15% (v/v) polyethylene glycol monomethyl ether 350 (PEGMME 350), 50 mM ADA (N-(2-Acetamido) iminodiacetic acid) (pH 6.5) and 12.5% (v/v) polyethylene glycol 2000 (PEG2000), protein concentration 5mg/ml, VAPOR DIFFUSION, HANGING DROP, temperature 293K |