7BZJ
The Discovery of Benzhydrol-Oxaborole Hybrid Derivatives as Leucyl-tRNA Synthetase Inhibitors
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-18 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 87.373, 87.373, 135.528 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.400 - 2.000 |
R-factor | 0.1893 |
Rwork | 0.188 |
R-free | 0.21660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k48 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (V1.18) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
Rmerge | 0.196 | 0.059 | 1.462 |
Rmeas | 0.199 | 0.060 | 1.497 |
Rpim | 0.033 | 0.010 | 0.317 |
Total number of observations | 728749 | ||
Number of reflections | 21319 | 1224 | 1041 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 100.0 | 99.9 | 99.9 |
Redundancy | 34.2 | 33.8 | 21.8 |
CC(1/2) | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.1M Bis-Tris (pH5.5), 2.1M ammonium sulfate |