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7BK4

Crystal structure of RXRalpha ligand binding domain in complex with a fragment of the TIF2 coactivator

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-19
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97934
Spacegroup nameC 1 2 1
Unit cell lengths179.132, 64.659, 48.514
Unit cell angles90.00, 95.28, 90.00
Refinement procedure
Resolution48.310 - 2.800
R-factor0.2473
Rwork0.246
R-free0.26540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3kwy
RMSD bond length0.015
RMSD bond angle1.372
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (7.1.005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.3102.900
High resolution limit [Å]2.8002.800
Rmerge0.0690.187
Number of reflections132511338
<I/σ(I)>16.52
Completeness [%]96.1
Redundancy3.1
CC(1/2)0.9950.678
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M Na Hepes, 0.2 M sodium acetate pH 7.5, 27% PEG 3350

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PDB entries from 2024-05-15

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