Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BBD

Crystal structure of monoubiquitinated TRIM21 RING (Ub-RING) In complex with ubiquitin charged Ube2N (Ube2N~Ub) and Ube2V2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-27
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9762
Spacegroup nameC 1 2 1
Unit cell lengths99.150, 108.360, 75.140
Unit cell angles90.00, 104.99, 90.00
Refinement procedure
Resolution19.990 - 2.200
R-factor0.2236
Rwork0.222
R-free0.25240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6s53 1ubq 1j74
RMSD bond length0.002
RMSD bond angle0.525
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.9902.279
High resolution limit [Å]2.2002.200
Rmerge0.0460.946
Rmeas0.049
Rpim0.018
Number of reflections387273856
<I/σ(I)>20.182.23
Completeness [%]99.499.15
Redundancy7.17.2
CC(1/2)1.0000.932
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP290.15MOPSO, Bis-Tris, PEG 4K, 1,2,6-hexanetriol, Li, Na, K

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon