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7B4E

Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R282W mutant bound to DNA and MQ: R282W-DNA-MQ

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-07
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.96770
Spacegroup nameC 1 2 1
Unit cell lengths136.505, 49.553, 33.401
Unit cell angles90.00, 93.44, 90.00
Refinement procedure
Resolution34.060 - 1.580
R-factor0.1684
Rwork0.166
R-free0.20130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ac0
RMSD bond length0.006
RMSD bond angle1.050
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2-3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.610
High resolution limit [Å]1.5704.2901.580
Rmerge0.1110.0590.610
Rmeas0.1160.0620.685
Rpim0.0340.0180.304
Number of reflections3018816051443
<I/σ(I)>6.3
Completeness [%]97.599.893.5
Redundancy10.111.94.4
CC(1/2)0.9980.716
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION6.1292Protein/DNA ratio 1:1.5, 0.1M Sodium Acetate, 20% w/v PEG 3350

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