Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7AXX

Structure of WDR5:CS-VIP8 crystal after illumination at 405 nm and room temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths46.030, 46.900, 126.320
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.010 - 1.790
R-factor0.16817
Rwork0.166
R-free0.21361
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6iam
RMSD bond length0.012
RMSD bond angle1.530
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.0101.859
High resolution limit [Å]1.7901.790
Rmerge0.0850.619
Rmeas0.0930.750
Rpim0.0370.411
Number of reflections258276956
<I/σ(I)>11.321.44
Completeness [%]96.166.56
Redundancy5.93.1
CC(1/2)0.9980.615
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5277.1510% (w/v) PEG20000, 20% (v/v) PEG550 MME, 0.02 M sodium formate, 0.02 M ammonium acetate, 0.02 M trisodium citrate, 0.02 M sodium potassium L-tartrate, 0.02 M sodium oxamate

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon