7AQF
Crystal Structure of Small Molecule Inhibitor TM5484 Bound to Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-stab)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 1 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-11-18 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.978560 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 135.296, 64.322, 106.644 |
| Unit cell angles | 90.00, 116.96, 90.00 |
Refinement procedure
| Resolution | 33.440 - 1.770 |
| R-factor | 0.1801 |
| Rwork | 0.178 |
| R-free | 0.21350 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6gwp |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 66.300 | 66.300 | 1.820 |
| High resolution limit [Å] | 1.730 | 5.460 | 1.730 |
| Rmerge | 0.091 | 0.039 | 1.208 |
| Rmeas | 0.099 | 0.043 | 1.305 |
| Rpim | 0.038 | 0.017 | 0.489 |
| Total number of observations | 576610 | 17279 | 85847 |
| Number of reflections | 85314 | 2813 | 12345 |
| <I/σ(I)> | 8.5 | 19.5 | 1.7 |
| Completeness [%] | 99.5 | 99.4 | 98.9 |
| Redundancy | 6.8 | 6.1 | 7 |
| CC(1/2) | 0.999 | 0.999 | 0.750 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 293 | 0.2 M TRISODIUM CITRATE, 10% w/v PEG 3350 |






