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7A78

Crystal structure of RXR beta LBD in complexes with palmitic acid and GRIP-1 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-01
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)1.0000
Spacegroup nameP 43 21 2
Unit cell lengths63.634, 63.634, 110.142
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.000 - 1.720
R-factor0.1779
Rwork0.176
R-free0.20370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6sjm
RMSD bond length0.013
RMSD bond angle1.356
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.00045.0001.780
High resolution limit [Å]1.7206.6601.720
Rmerge0.0590.0380.875
Rmeas0.0660.0410.990
Rpim0.0230.0150.341
Number of reflections248215272373
<I/σ(I)>15.32.3
Completeness [%]100.099.8100
Redundancy87.18.3
CC(1/2)0.9990.9990.769
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293.1516% low molecular weight PEG smears, 0.1M HEPES, pH 7.5, 5% ethylene glycol, 0.1M KCl

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PDB entries from 2024-07-17

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