7A0D
The Crystal Structure of Bovine Thrombin in complex with Hirudin (C16U/C28U) at 1.6 Angstroms Resolution
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-09-30 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9786 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 58.672, 102.374, 142.735 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.180 - 1.600 |
| Rwork | 0.183 |
| R-free | 0.21540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1hrt |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.814 |
| Data reduction software | Aimless |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.180 | 1.630 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.096 | 2.370 |
| Rmeas | 0.100 | 2.470 |
| Rpim | 0.028 | 0.693 |
| Number of reflections | 56998 | 2752 |
| <I/σ(I)> | 13.8 | 1.1 |
| Completeness [%] | 99.9 | 98.3 |
| Redundancy | 13 | 12.5 |
| CC(1/2) | 0.999 | 0.421 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.7 | 297 | 38% PEG 4000, 0.1 M sodium phosphate (pH= 4.7), 0.2 M NaCl |






