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7XL1

Crystal structure of chimeric 7D12-Vob nanobody at 1.65 Angstrom

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-16
DetectorDECTRIS EIGER R 4M
Wavelength(s)1.000
Spacegroup nameP 42 21 2
Unit cell lengths68.580, 68.580, 103.660
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.440 - 1.650
R-factor0.158
Rwork0.156
R-free0.20600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7xl0
RMSD bond length0.007
RMSD bond angle1.431
Data reduction softwareMOSFLM (7.2.2)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER (2.8.2)
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.5001.740
High resolution limit [Å]1.6501.650
Rmerge0.1080.963
Rmeas0.327
Rpim0.0380.327
Number of reflections300424233
<I/σ(I)>122.3
Completeness [%]98.897.8
Redundancy8.79.2
CC(1/2)0.9970.724
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.2 M sodium malonate pH 4.0 20% PEG 3,350

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