Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7VYT

Crystal structure of human TIGIT(23-129) in complex with the scFv fragment of anti-TIGIT antibody MG1131

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-06
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.97957
Spacegroup nameP 1 21 1
Unit cell lengths69.670, 79.820, 77.970
Unit cell angles90.00, 100.55, 90.00
Refinement procedure
Resolution29.330 - 1.530
R-factor0.2021
Rwork0.201
R-free0.21900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ehv 3ucr
RMSD bond length0.012
RMSD bond angle1.196
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.3301.585
High resolution limit [Å]1.5301.530
Rmerge0.065
Number of reflections12632512553
<I/σ(I)>16
Completeness [%]99.9
Redundancy7
CC(1/2)0.9990.703
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.15200mM ammonium citrate, 20% (v/v) polyethylene glycol 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon