7VUX
Complex structure of PD1 and 609A-Fab
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2020-05-09 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97915 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 56.290, 68.410, 77.310 |
| Unit cell angles | 90.00, 99.44, 90.00 |
Refinement procedure
| Resolution | 48.910 - 1.640 |
| R-factor | 0.1617 |
| Rwork | 0.160 |
| R-free | 0.20190 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5wt9 |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.784 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.910 | 1.670 |
| High resolution limit [Å] | 1.640 | 1.640 |
| Rmerge | 0.049 | 0.457 |
| Rmeas | 0.067 | 0.618 |
| Rpim | 0.045 | 0.413 |
| Number of reflections | 70749 | 3505 |
| <I/σ(I)> | 12.5 | 2.2 |
| Completeness [%] | 99.7 | 99.9 |
| Redundancy | 3.3 | 3.4 |
| CC(1/2) | 0.996 | 0.842 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 0.2 M Ammonium formate, pH 6.6, 20% w/v PEG 3350 |
