7VDU
The structure of cyclin-dependent kinase 2 (CDK2) in complex with Compound 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.999891638756 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.851, 73.035, 70.731 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.810 - 1.530 |
R-factor | 0.1804 |
Rwork | 0.176 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gz8 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.450 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.810 | 1.780 |
High resolution limit [Å] | 1.530 | 1.530 |
Rmeas | 0.055 | 0.517 |
Number of reflections | 42212 | 15329 |
<I/σ(I)> | 14.57 | 3.47 |
Completeness [%] | 98.6 | 99.4 |
Redundancy | 4.1 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 12% (w/v) PEG 3350, 0.10 M MES pH=7.00 |