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7S87

Crystal Structure of Dihydroorotate dehydrogenase from Plasmodium falciparum in complex with Orotate, FMN, and inhibitor NCGC00600348-01

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-E
Synchrotron siteAPS
Beamline21-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979
Spacegroup nameC 2 2 2
Unit cell lengths124.726, 161.093, 92.569
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.500 - 2.750
R-factor0.1728
Rwork0.170
R-free0.23000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vty
RMSD bond length0.005
RMSD bond angle0.953
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]98.6002.880
High resolution limit [Å]2.7502.750
Rmerge0.1320.653
Rmeas0.1430.710
Rpim0.054
Number of reflections241453084
<I/σ(I)>12.23.6
Completeness [%]98.4
Redundancy6.86.6
CC(1/2)0.9950.847
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.72930.16 M Ammonium Sulfate, 0.1 M Sodium Acetate, 18% PEG4000, 10 mM DTT. Protein was co-crystallized with 2 mM DHOD, 5 mM NCGC00600348-01. cryo: 25% Glycerol

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