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7RXW

Human Methionine Adenosyltransferase 2A bound to Methylthioadenosine and inhibitor imido-diphosphate (PNP)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-11
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.98
Spacegroup nameI 2 2 2
Unit cell lengths68.322, 94.069, 117.344
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.890 - 1.070
R-factor0.1284
Rwork0.128
R-free0.13820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7l1a
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.19rc5_4047)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.89019.8901.070
High resolution limit [Å]1.0505.7501.050
Rmerge0.0540.0490.388
Rmeas0.0570.0510.443
Rpim0.0160.0150.211
Total number of observations17715331449814828
Number of reflections16073411603498
<I/σ(I)>26.251.34.1
Completeness [%]91.897.540.8
Redundancy1112.54.2
CC(1/2)0.9990.9970.888
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7292100 mM ammonium citrate and 12% PEG-3350

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PDB entries from 2024-12-25

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