7Q3P
Crystal structure of IgG1-Fc-MST-HN (efgartigimod)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 96.408, 87.935, 106.093 |
Unit cell angles | 90.00, 114.04, 90.00 |
Refinement procedure
Resolution | 48.140 - 2.100 |
R-factor | 0.19 |
Rwork | 0.189 |
R-free | 0.21390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4n0u |
RMSD bond length | 0.009 |
RMSD bond angle | 1.331 |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.140 | 2.172 |
High resolution limit [Å] | 2.097 | 2.097 |
Number of reflections | 46871 | 4414 |
<I/σ(I)> | 12.42 | 1.09 |
Completeness [%] | 98.8 | 93.89 |
Redundancy | 7 | 6.9 |
CC(1/2) | 0.998 | 0.464 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.1 | 294 | 20% w/v PEG3350 pH 5.1. Cyroprotectant: mother liquid + 20% ethylene glycol (final concentration) |