7LEJ
Crystal structure of the second bromodomain (BD2) of human BRDT bound to Volasertib
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-04-21 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 72.910, 72.910, 50.310 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 36.455 - 1.730 |
| R-factor | 0.1919 |
| Rwork | 0.191 |
| R-free | 0.21050 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5vbq |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 36.455 | 36.455 | 1.770 |
| High resolution limit [Å] | 1.730 | 7.740 | 1.730 |
| Rmerge | 0.046 | 0.041 | 0.467 |
| Rmeas | 0.048 | 0.044 | 0.489 |
| Total number of observations | 178097 | ||
| Number of reflections | 16418 | 217 | 1204 |
| <I/σ(I)> | 29.71 | 53.9 | 6.54 |
| Completeness [%] | 99.8 | 99.1 | 99.6 |
| Redundancy | 10.848 | 9.115 | 11.149 |
| CC(1/2) | 0.999 | 0.998 | 0.966 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M Magnesium acetate tetrahydrate, 0.1 M sodium cacodylate trihydrate (pH 6.5), 20 % w/v PEG 8,000 |






