7LB4
Crystal structure of the second bromodomain (BD2) of human BRD3 bound to bromosporine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-08-06 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 40.062, 47.638, 64.728 |
| Unit cell angles | 90.00, 107.84, 90.00 |
Refinement procedure
| Resolution | 38.135 - 2.004 |
| R-factor | 0.182 |
| Rwork | 0.178 |
| R-free | 0.22910 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7l9l |
| Data reduction software | XDS |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 100.000 | 100.000 | 2.030 |
| High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
| Rmerge | 0.079 | 0.043 | 0.441 |
| Rmeas | 0.092 | 0.051 | 0.524 |
| Rpim | 0.048 | 0.027 | 0.280 |
| Total number of observations | 56172 | ||
| Number of reflections | 15413 | 830 | 697 |
| <I/σ(I)> | 8.9 | ||
| Completeness [%] | 97.8 | 99.6 | 93.8 |
| Redundancy | 3.6 | 3.4 | 3.2 |
| CC(1/2) | 0.997 | 0.863 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M HEPES pH 7.5, 10 % w/v Polyethylene glycol 6,000, 5 % v/v (+/-)-2-Methyl-2,4-pentanediol |






