7L27
Crystal structure of the catalytic domain of human PDE3A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-11 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.976251 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 82.370, 58.790, 157.660 |
Unit cell angles | 90.00, 90.69, 90.00 |
Refinement procedure
Resolution | 47.850 - 1.700 |
R-factor | 0.1955 |
Rwork | 0.194 |
R-free | 0.22010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1so2 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.810 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.850 | 47.850 | 1.810 |
High resolution limit [Å] | 1.700 | 5.080 | 1.700 |
Rmerge | 0.056 | 0.049 | 0.829 |
Rmeas | 0.067 | 0.059 | 0.994 |
Total number of observations | 533926 | ||
Number of reflections | 164272 | 6335 | 27327 |
<I/σ(I)> | 11.29 | 24.46 | 1.35 |
Completeness [%] | 98.8 | 97.6 | 96.4 |
Redundancy | 3.25 | 3.043 | 3.186 |
CC(1/2) | 0.997 | 0.993 | 0.665 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 293.15 | MES, PEG 3350, calcium acetate |