7KGU
Structure of 2Q1-Fab, an antibody selective for IDH2R140Q-HLA-B*07:02
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | OTHER |
Temperature [K] | 277 |
Detector technology | PIXEL |
Collection date | 2019-10-04 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92009 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.462, 263.955, 91.237 |
Unit cell angles | 90.00, 99.53, 90.00 |
Refinement procedure
Resolution | 45.530 - 2.400 |
R-factor | 0.2111 |
Rwork | 0.208 |
R-free | 0.26860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6uj9 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.812 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.530 | 45.530 | 2.460 |
High resolution limit [Å] | 2.400 | 10.730 | 2.400 |
Rmerge | 0.096 | 0.035 | 0.468 |
Rmeas | 0.118 | 0.043 | 0.592 |
Total number of observations | 197009 | ||
Number of reflections | 68740 | 771 | 4985 |
<I/σ(I)> | 8.82 | 23.26 | 2.08 |
Completeness [%] | 98.7 | 95.4 | 98.8 |
Redundancy | 2.866 | 2.911 | 2.627 |
CC(1/2) | 0.993 | 0.997 | 0.676 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M Bis-Tris pH 5.5, 25% (w/v) PEG 3350, 0.2 M ammonium sulfate |