7DN4
The crystal structure of Cpd8 in complex with BPTF bromodomain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.978750 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 166.751, 166.751, 161.484 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 53.823 - 2.841 |
R-factor | 0.271 |
Rwork | 0.267 |
R-free | 0.34610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3uv2 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.518 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 144.411 | 2.890 |
High resolution limit [Å] | 2.841 | 2.841 |
Number of reflections | 31789 | 31789 |
<I/σ(I)> | 8.2 | |
Completeness [%] | 99.9 | |
Redundancy | 39.2 | |
CC(1/2) | 0.987 | 0.988 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 2 M Ammonium sulfate, 0.2M Potassium sodium tartrate tetrahydrate, 0.1M Sodium citrate, pH5.6 |