7BYI
Structure of SHMT2 in complex with CBX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9778 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 158.620, 158.620, 209.427 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.500 - 2.760 |
R-factor | 0.2453 |
Rwork | 0.242 |
R-free | 0.31080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6h3c |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.840 |
High resolution limit [Å] | 2.760 | 2.760 |
Number of reflections | 38383 | 6297 |
<I/σ(I)> | 18.25 | |
Completeness [%] | 100.0 | |
Redundancy | 21.2 | |
CC(1/2) | 0.973 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1 M Sodium dihydrogen phosphate pH 6.5, 16% PEG 2000,2.5mM Carbenoxolone Sodium |