7BE6
Structure of DDR1 receptor tyrosine kinase in complex with inhibitor SR159
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.92819 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 63.023, 131.967, 43.803 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.984 - 1.871 |
R-factor | 0.188989674436 |
Rwork | 0.187 |
R-free | 0.23044 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fdx |
RMSD bond length | 0.008 |
RMSD bond angle | 0.882 |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.984 | 1.900 |
High resolution limit [Å] | 1.870 | 1.870 |
Number of reflections | 31065 | 1542 |
<I/σ(I)> | 11.8 | 2.1 |
Completeness [%] | 100.0 | 99.7 |
Redundancy | 9.9 | 10.3 |
CC(1/2) | 0.999 | 0.855 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 20% PEG 3350, 10% ethylene glycol, 0.1 M BisTrisPropane pH 6.5, 0.2 M sodium sulfate (50 nL protein and 100 nL reservoir) |