7B4D
Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273C/S240R double mutant bound to DNA and MQ: R273C/S240R-DNA-MQ
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2015-10-10 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54178 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 137.587, 50.164, 34.231 |
| Unit cell angles | 90.00, 92.60, 90.00 |
Refinement procedure
| Resolution | 18.280 - 1.850 |
| R-factor | 0.1721 |
| Rwork | 0.168 |
| R-free | 0.20430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2ac0 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.239 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 25.000 | 25.000 | 1.880 |
| High resolution limit [Å] | 1.850 | 5.010 | 1.850 |
| Rmerge | 0.057 | 0.033 | 0.508 |
| Rmeas | 0.061 | 0.035 | 0.552 |
| Rpim | 0.019 | 0.011 | 0.210 |
| Total number of observations | 181291 | ||
| Number of reflections | 19150 | 1026 | 885 |
| <I/σ(I)> | 12.9 | ||
| Completeness [%] | 95.6 | 97.9 | 88.1 |
| Redundancy | 9.5 | 9.4 | 6.2 |
| CC(1/2) | 0.999 | 0.909 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 6.1 | 292 | Protein/DNA ratio 1:2.4, 0.2M Sodium formate, 20% w/v PEG 3350 |






