6ZX9
Crystal structure of SIV Vpr,fused to T4 lysozyme, isolated from moustached monkey, bound to human DDB1 and human DCAF1 (amino acid residues 1046-1396)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 265.898, 95.540, 98.348 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.066 - 2.520 |
R-factor | 0.218135520807 |
Rwork | 0.216 |
R-free | 0.26050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6zue 1qt6 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.811 |
Data reduction software | XDS (XDSAPP) |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.070 | 2.560 |
High resolution limit [Å] | 2.510 | 2.520 |
Number of reflections | 85560 | 6264 |
<I/σ(I)> | 9.78 | |
Completeness [%] | 99.7 | |
Redundancy | 6.6 | |
CC(1/2) | 0.996 | 0.480 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 8-10% PEG 4000 (w/v), 200 mM MgCl2, 100 mM HEPES-NaOH, pH 7.0-8.2. |