6ZMK
Crystal structure of human GFAT-1 L405R
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-02-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 152.945, 152.945, 166.213 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.310 - 2.382 |
R-factor | 0.1932 |
Rwork | 0.193 |
R-free | 0.21060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6r4e |
RMSD bond length | 0.002 |
RMSD bond angle | 0.452 |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | XDS (Mar 15, 2019) |
Phasing software | PHENIX (dev_2499) |
Refinement software | PHENIX (dev_2499) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.310 | 2.470 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 78975 | 7737 |
<I/σ(I)> | 20.15 | |
Completeness [%] | 99.9 | |
Redundancy | 13.4 | |
CC(1/2) | 0.999 | 0.501 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Bis tris propane pH 8.5, 0.3 M Potassium sodium tartrate, 20 % PEG3350 |