6Z6Z
Crystal structure of an Anticalin directed towards colchicine without ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-29 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.91840 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 38.557, 75.579, 116.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.340 - 1.780 |
R-factor | 0.2036 |
Rwork | 0.201 |
R-free | 0.25850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5nkn |
RMSD bond length | 0.007 |
RMSD bond angle | 1.375 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 63.343 | 63.343 | 1.880 |
High resolution limit [Å] | 1.779 | 5.630 | 1.780 |
Rmerge | 0.035 | 0.418 | |
Rmeas | 0.064 | 0.036 | 0.438 |
Rpim | 0.019 | 0.011 | 0.129 |
Total number of observations | 175641 | 5922 | 26816 |
Number of reflections | 16656 | 586 | 2397 |
<I/σ(I)> | 17.6 | 45.2 | 4.9 |
Completeness [%] | 99.6 | 99 | 99.8 |
Redundancy | 10.5 | 10.1 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | PEG 3350, calcium chloride |