6Z1M
Structure of an Ancestral glycosidase (family 1) bound to heme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-28 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.934, 89.496, 141.120 |
Unit cell angles | 90.00, 94.21, 90.00 |
Refinement procedure
Resolution | 55.320 - 2.450 |
R-factor | 0.1776 |
Rwork | 0.175 |
R-free | 0.22060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j78 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.719 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.320 | 2.540 |
High resolution limit [Å] | 2.450 | 2.450 |
Number of reflections | 53447 | 5335 |
<I/σ(I)> | 10.15 | 1.44 |
Completeness [%] | 99.0 | |
Redundancy | 3.2 | |
CC(1/2) | 0.997 | 0.718 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | HRI (#9): 0.2 M Ammonium acetate, 0.1 M Sodium citrate tribasic dihydrate pH 5.6, 30% w/v PEG 4.000 |