6YXJ
Crystal structure of SARS-CoV macrodomain II in complex with human Paip1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-23 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.9184 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 92.386, 92.386, 166.628 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.940 - 3.500 |
R-factor | 0.3142 |
Rwork | 0.313 |
R-free | 0.33550 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | SHELXCD |
Refinement software | BUSTER (2.10.3 (20-MAY-2020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.020 | 3.690 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.095 | 1.250 |
Number of reflections | 10784 | 1549 |
<I/σ(I)> | 10.8 | 1.8 |
Completeness [%] | 99.3 | 99.7 |
Redundancy | 5.9 | |
CC(1/2) | 0.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M (NH4)2SO4, 0.1 M HEPES pH 7.3, 18% PEG 3,350, 15% glycerol | |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M (NH4)2SO4, 0.1 M HEPES pH 7.3, 18% PEG 3,350, 15% glycerol |