6YPX
Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 2.11 A in C2221 space group
This is a non-PDB format compatible entry.
Replaces: 4NJZExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-29 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9669 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 138.411, 153.992, 74.785 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 102.940 - 2.110 |
Rwork | 0.148 |
R-free | 0.18450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tw2 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.613 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP (11.2.05) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 102.940 | 2.170 |
High resolution limit [Å] | 2.110 | 2.110 |
Rmerge | 0.220 | 1.041 |
Rmeas | 0.240 | 1.194 |
Rpim | 0.094 | 0.568 |
Number of reflections | 46164 | 3623 |
<I/σ(I)> | 11.3 | 2 |
Completeness [%] | 99.6 | 96.4 |
Redundancy | 12.2 | 7.4 |
CC(1/2) | 0.994 | 0.697 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 281 | 0.2 M sodium citrate, 0.1 M sodium cacodylate, 30 % 2-propanol |