6X91
Crystal structure of MBP-fused human APOBEC1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.28345 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 177.715, 179.209, 210.505 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.610 - 3.510 |
R-factor | 0.2784 |
Rwork | 0.276 |
R-free | 0.29800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 1ANF & 2NYT |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.560 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 1.150 | |
Number of reflections | 83654 | 4100 |
<I/σ(I)> | 5.22 | |
Completeness [%] | 99.2 | 98.1 |
Redundancy | 4.9 | 3.7 |
CC(1/2) | 0.883 | 0.213 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 0.2 M potassium chloride, 0.2 M magnesium acetate tetrahydrate, 0.05 M sodium cacodylate, pH 6.0, 8.5% PEG8000 |