6WW3
Crystal structure of HERC2 ZZ domain in complex with SUMO1 tail
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-22 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.882, 47.262, 55.476 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.426 - 2.096 |
R-factor | 0.1869 |
Rwork | 0.185 |
R-free | 0.22680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ds6 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.961 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
Rmerge | 0.181 | 0.103 | 0.476 |
Rmeas | 0.215 | 0.120 | 0.578 |
Rpim | 0.113 | 0.062 | 0.322 |
Total number of observations | 22967 | ||
Number of reflections | 7588 | 735 | 773 |
<I/σ(I)> | 3.5 | ||
Completeness [%] | 89.2 | 78.8 | 93.2 |
Redundancy | 3 | 2.9 | 2.8 |
CC(1/2) | 0.991 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M ammonium chloride, 0.1 M Tris, pH 8.0 and 20% PEG 6000 |