6WK6
Crystal structure of human polymerase eta complexed with Xanthine containing DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2018-11-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 |
Unit cell lengths | 98.930, 98.930, 81.552 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.460 - 2.350 |
Rwork | 0.189 |
R-free | 0.23770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o3n |
RMSD bond length | 0.008 |
RMSD bond angle | 1.187 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.400 |
High resolution limit [Å] | 2.350 | 2.350 |
Rpim | 0.064 | 0.431 |
Number of reflections | 19116 | 1039 |
<I/σ(I)> | 10 | |
Completeness [%] | 99.9 | |
Redundancy | 9.6 | |
CC(1/2) | 0.574 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MES pH 6 5 mM magnesium chloride 18% PEG 2000 MME |