6W3Z
Crystal Structure of Brugia malayi Deoxyhypusine synthase (DHPS)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96858 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.753, 136.320, 75.883 |
Unit cell angles | 90.00, 92.92, 90.00 |
Refinement procedure
Resolution | 29.410 - 2.300 |
R-factor | 0.1894 |
Rwork | 0.188 |
R-free | 0.21570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rqd |
RMSD bond length | 0.004 |
RMSD bond angle | 1.259 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.420 | 29.410 | 2.360 |
High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
Rmerge | 0.129 | 0.034 | 0.880 |
Rmeas | 0.155 | 0.040 | 1.048 |
Rpim | 0.084 | 0.022 | 0.563 |
Total number of observations | 2129 | 15458 | |
Number of reflections | 62547 | 690 | 4609 |
<I/σ(I)> | 5.4 | 16.7 | 1.1 |
Completeness [%] | 99.6 | 94.6 | 99.7 |
Redundancy | 3.3 | 3.1 | 3.4 |
CC(1/2) | 0.992 | 0.996 | 0.565 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20% PEG3350 0.2M ammonium citrate dibasic |