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6W0M

Human 8-oxoguanine glycosylase crosslinked with oxoG lesion containing DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2013-03-19
DetectorADSC QUANTUM 315
Wavelength(s)0.9792
Spacegroup nameP 65 2 2
Unit cell lengths91.678, 91.678, 212.106
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.840 - 2.370
R-factor0.2
Rwork0.197
R-free0.26550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ebm
RMSD bond length0.009
RMSD bond angle1.448
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.8402.500
High resolution limit [Å]2.3702.370
Rmerge0.0860.746
Number of reflections223613154
<I/σ(I)>35.2
Completeness [%]99.8
Redundancy20.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293100 mM sodium cacodylate, pH 6.5, 200 mM MgCl2, and 18 % polyethylene glycol 8000.

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PDB entries from 2024-07-10

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