6VRD
Crystal structure of RNase H/RNA/PS-ASO complex at an atomic level
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.760, 53.030, 106.477 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.133 - 1.299 |
R-factor | 0.1914 |
Rwork | 0.190 |
R-free | 0.22860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qk9 |
Data reduction software | XDS (vJan10,2014) |
Data scaling software | Aimless (v0.7.4) |
Phasing software | PHASER (v2.8.3) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.133 | 1.346 |
High resolution limit [Å] | 1.299 | 1.299 |
Number of reflections | 65937 | 6385 |
<I/σ(I)> | 12.67 | |
Completeness [%] | 99.8 | |
Redundancy | 2 | |
CC(1/2) | 1.000 | 0.397 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.8 M Ammonium sulphate, 0.1 M citrate pH 4.0 |