6VJH
The crystal structure of the 2009 H1N1/California PA endonuclease wild type in complex with SJ000986192
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 88.971, 88.971, 133.396 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.460 - 2.550 |
R-factor | 0.2265 |
Rwork | 0.225 |
R-free | 0.24660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.020 | 2.660 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.083 | 0.817 |
Rmeas | 0.093 | 0.913 |
Rpim | 0.041 | 0.400 |
Number of reflections | 8461 | 1001 |
<I/σ(I)> | 9.4 | 2 |
Completeness [%] | 94.6 | 95.6 |
Redundancy | 5.1 | 4.9 |
CC(1/2) | 0.997 | 0.758 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15 |