6VFF
Dimer of Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-04-03 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 170.000, 63.210, 142.200 |
| Unit cell angles | 90.00, 118.13, 90.00 |
Refinement procedure
| Resolution | 37.480 - 2.800 |
| R-factor | 0.1991 |
| Rwork | 0.197 |
| R-free | 0.24830 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5ed2 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.247 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 37.480 | 37.480 | 2.870 |
| High resolution limit [Å] | 2.800 | 12.520 | 2.800 |
| Rmerge | 0.094 | 0.019 | 1.181 |
| Rmeas | 0.104 | 0.021 | 1.306 |
| Number of reflections | 32384 | 385 | 2260 |
| <I/σ(I)> | 14.14 | 58.86 | 1.56 |
| Completeness [%] | 97.3 | 92.8 | 92.1 |
| Redundancy | 5.522 | 5.244 | 5.422 |
| CC(1/2) | 0.998 | 1.000 | 0.611 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 50mM MOPS pH 7.0, 20% w/v PEG 4000, 100 mM NaCl |






