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6VFF

Dimer of Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths170.000, 63.210, 142.200
Unit cell angles90.00, 118.13, 90.00
Refinement procedure
Resolution37.480 - 2.800
R-factor0.1991
Rwork0.197
R-free0.24830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ed2
RMSD bond length0.008
RMSD bond angle1.247
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.48037.4802.870
High resolution limit [Å]2.80012.5202.800
Rmerge0.0940.0191.181
Rmeas0.1040.0211.306
Number of reflections323843852260
<I/σ(I)>14.1458.861.56
Completeness [%]97.392.892.1
Redundancy5.5225.2445.422
CC(1/2)0.9981.0000.611
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729850mM MOPS pH 7.0, 20% w/v PEG 4000, 100 mM NaCl

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