6V53
The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ000985494
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-05 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 89.731, 89.731, 132.135 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.720 - 2.200 |
R-factor | 0.2348 |
Rwork | 0.232 |
R-free | 0.29120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17rc1_3605) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.230 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.067 | 1.353 |
Rmeas | 0.073 | 1.472 |
Rpim | 0.029 | 0.573 |
Number of reflections | 14000 | 1195 |
<I/σ(I)> | 14.6 | 2 |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 6.4 | 6.4 |
CC(1/2) | 0.998 | 0.695 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15 |