6V2R
Crystal Structure of chromodomain of CBX7 mutant V13A in complex with inhibitor UNC3866
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-15 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 40.193, 40.193, 83.127 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.460 - 1.600 |
R-factor | 0.1957 |
Rwork | 0.193 |
R-free | 0.23540 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | isomorphous to PDB entry 5EPJ |
RMSD bond length | 0.014 |
RMSD bond angle | 1.273 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | REFMAC |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.460 | 23.460 | 1.600 |
High resolution limit [Å] | 1.570 | 8.620 | 1.570 |
Rmerge | 0.041 | 0.026 | 0.548 |
Rmeas | 0.042 | 0.028 | 0.572 |
Number of reflections | 10074 | 88 | 484 |
<I/σ(I)> | 43 | 92.9 | 5 |
Completeness [%] | 100.0 | ||
Redundancy | 12.9 | 8.3 | 12.6 |
CC(1/2) | 1.000 | 1.000 | 0.943 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 1.5 M ammonium sulfate, 0.1 M bis-tris propane, pH 7 |