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6V16

Crystal structure of the bromodomain of human BRD7 bound to TP472

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsCu FINE FOCUS
Temperature [K]100
Detector technologyCCD
Collection date2019-02-15
DetectorRIGAKU SATURN 944
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths47.084, 33.497, 76.561
Unit cell angles90.00, 98.45, 90.00
Refinement procedure
Resolution46.573 - 1.900
R-factor0.1895
Rwork0.188
R-free0.22150
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ppa
Data reduction softwareDIALS
Data scaling softwareAimless (0.5.1)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14-3260_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.57346.5701.940
High resolution limit [Å]1.9009.1101.900
Rmerge0.0780.0980.169
Rmeas0.0920.1180.199
Rpim0.0480.0640.104
Total number of observations5834106
Number of reflections186961961183
<I/σ(I)>8.813.43.7
Completeness [%]98.299.195.7
Redundancy3.633.5
CC(1/2)0.9910.9420.953
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M (NH4)2SO4, 0.05 M Bis-tris (pH 6.5), and 30 % Pentaerythritol ethoxylate

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