6V16
Crystal structure of the bromodomain of human BRD7 bound to TP472
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | Cu FINE FOCUS |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-02-15 |
| Detector | RIGAKU SATURN 944 |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 47.084, 33.497, 76.561 |
| Unit cell angles | 90.00, 98.45, 90.00 |
Refinement procedure
| Resolution | 46.573 - 1.900 |
| R-factor | 0.1895 |
| Rwork | 0.188 |
| R-free | 0.22150 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6ppa |
| Data reduction software | DIALS |
| Data scaling software | Aimless (0.5.1) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14-3260_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 46.573 | 46.570 | 1.940 |
| High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
| Rmerge | 0.078 | 0.098 | 0.169 |
| Rmeas | 0.092 | 0.118 | 0.199 |
| Rpim | 0.048 | 0.064 | 0.104 |
| Total number of observations | 583 | 4106 | |
| Number of reflections | 18696 | 196 | 1183 |
| <I/σ(I)> | 8.8 | 13.4 | 3.7 |
| Completeness [%] | 98.2 | 99.1 | 95.7 |
| Redundancy | 3.6 | 3 | 3.5 |
| CC(1/2) | 0.991 | 0.942 | 0.953 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M (NH4)2SO4, 0.05 M Bis-tris (pH 6.5), and 30 % Pentaerythritol ethoxylate |






