Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6US5

DNA polymerase I Large Fragment from Bacillus stearothermophilus with DNA template, 3'-amino primer, dGpNHpp analog, and Mn2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]99
Detector technologyCCD
Collection date2019-09-25
DetectorMAR CCD 130 mm
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths93.761, 108.805, 149.969
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.060 - 2.250
R-factor0.2269
Rwork0.224
R-free0.27840
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1l5u
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.17_3644)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.330
High resolution limit [Å]2.2502.250
Rmerge0.1250.605
Rmeas0.1470.717
Rpim0.0760.379
Number of reflections724986573
<I/σ(I)>102.67
Completeness [%]98.490.4
Redundancy3.63.3
CC(1/2)0.9660.752
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.42910.1 M MES, pH 5.4, 2M ammonium sulfate, 10 mM MnSO4, 5 % MPD

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon