6UPG
Crystal structure of Mycobacterium tuberculosis CYP121 in complex with cYF-4-OMe
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 77.460, 77.460, 262.588 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.919 - 1.393 |
R-factor | 0.1857 |
Rwork | 0.185 |
R-free | 0.19470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wp2 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX (1.15.2_3472) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.410 |
High resolution limit [Å] | 1.390 | 3.770 | 1.390 |
Rmerge | 0.128 | 0.097 | 0.389 |
Rmeas | 0.132 | 0.099 | 0.399 |
Rpim | 0.029 | 0.022 | 0.087 |
Total number of observations | 1898703 | ||
Number of reflections | 93972 | 5274 | 3961 |
<I/σ(I)> | 4.8 | ||
Completeness [%] | 99.2 | 99.9 | 85.5 |
Redundancy | 20.2 | 20.4 | 19.3 |
CC(1/2) | 0.996 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 279.2 | 1.95 M ammonium sulfate, 100 mM MES, pH 5.1-5.3 |