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6T22

N-terminal domain of EcoKMcrA restriction endonuclease (NEco) in complex with T5hmCGA target sequence

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-14
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9195
Spacegroup nameP 61 2 2
Unit cell lengths113.417, 113.417, 156.367
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.540 - 2.210
R-factor0.1592
Rwork0.157
R-free0.20340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ghc
RMSD bond length0.005
RMSD bond angle1.210
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.5402.340
High resolution limit [Å]2.2102.210
Rmerge0.0841.761
Rmeas0.0861.802
Number of reflections302984597
<I/σ(I)>38.151.91
Completeness [%]99.295.4
Redundancy35.820.8
CC(1/2)1.0000.734
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52911.8 ul of protein-DNA solution (436:523 uM) was mixed with 2.2 ul of the F1 condition of the PACT premier crystal screen (MDL) (0.2 M Sodium fluoride, 0.1 M Bis-Tris propane, pH 6.5, 20% PEG 3350) and cryo-protected with an addition of 25% glycerol.

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